Manual Adjustments

Author

Steffi LaZerte

Published

July 4, 2024

Here we’ll apply manual adjustments to the bouts and transitions we identified in the previous step.

Setup

source("XX_setup.R")

all_bad <- read_rds("Data/02_Datasets/bad_bouts.rds")
bouts <- read_rds("Data/02_Datasets/bouts_initial.rds")
dist <- read_rds("Data/02_Datasets/stn_dist.rds")

Manual

Manually identified issues

Code
fix <- tribble(
  ~tagDeployID, ~stn_group, ~start, ~end, ~note,
  17852, "4945", "2018", "", "",
  17856, "4726-4790", "2018-09-18", "2018-10-15",  "Based on this group",
  18548, "4726-4790", "2018-09-15", "2018-10-15", "",
  18880, "4726-4790", "2018-09-22", "2018-10-15", "",  
  # 18899 # Checked and probably good, despite reversal
  18916, "4726-4790", "2018-09-15", "2018-10-15", "",
  # 29770 # Checked and probably good, despite going north through BC
  29919, "5418", "2020", "", "",
  34266, "7908-7930-7934", "2021-09-11", "2021-09-15", "",
  35290, "7624-8039", "2021-09-20", "2021-10-16", "",
  35605, "7662", "2021", "",  "Maybe?",
  35914, "7624-8039-8045-8194", "2021-09-15", "2021-10-20", "",
  36310, "7624-8039-8045-8194", "2021-09-20", "2021-10-16",  "based on the above, but none look good",
  39546, "8845", "2022", "", "",
  39554, "9193", "2022", "", "",
  39555, "8845", "2022", "", "",
  39557, "8845-9036", "2022", "", "",
  39557, "9194", "2022", "",  "Also not sure about the 8279 or 8950",
  39570, "9192-9194", "2022", "",  "",
  39585, "7905-7906-7930-7934-8760", "2022-09-19", "",   "Not sure about 8190, but 8283 looks good",
  39609, "9150-9192", "2022", "", "",
  39612, "3454", "2022", "", "",
  39615, "9036", "2022", "", "",
  39615, "9193", "2022", "",  "Also not really sure about 7662... 8593 is good though",
  39618, "8769", "2022", "", "",
  41242, "5511-8296-8415", "2022-10-01", "2022-12-01", "",
  41657, "6115", "2022", "", "",
  41674, "6115", "2022", "", "",
  41700, "7624-8845-8857-9030-9036-9049", "2022-09-29", "", "",
  41826, "8845-8847-9030-9036-9049", "2022-09-26", "", "",
  42002, "7624-8845-8857-9030-9036-9049", "2022-10-01", "", "",
  42474, "7624-8845-9021-9028-9030-9036-9049", "2022-09-23", "", "",
  42476, "8845-9030-9036-9049", "2022-09-19", "", "",
  42787, "8194-8845-9030-9036-9049", "2022-09-15 05:00:00", "2022-10-15", "",
  42890, "8194-8845-9030-9036-9049", "2022-10-15", "2022-11-05", "",
  42974, "8845-9030-9036-9049", "2022-09-29", "", "",
  42996, "9193-9194", "2022", "", "",
  43000, "8194-8845-9036-9049", "2022-10-15", "2022-11-01",   "Not sure about 8193",
  43016, "8544", "2023", "",  "Probably not really all that bad, but just too far to be considered a group member, and only gets the odd ping", 
  43065, "8194-8845-9030-9036-9049", "2022-10-02", "2022-10-10", "",
  43258, "8194-8845-9030-9036-9049", "2022-10-19 02:00:00", "", "",
  43351, "8194-8845-9030-9036-9049", "2022-10-15", "2022-11-01", "",
  
  43460, "5068", "2023", "", "Montreal to Indiana?",
  43518, "5068", "2023", "", "Montreal to Indiana?",
  43637, "5068", "2023", "", "Montreal to Indiana?",
  43638, "5068", "2023", "", "Montreal to Indiana?",
  43639, "5068", "2023", "", "Montreal to Indiana?",
  43640, "5068", "2023", "", "Montreal to Indiana?",
  43718, "5068", "2023", "", "Montreal to Indiana?",
  43719, "5068", "2023", "", "Montreal to Indiana?",
  43768, "5068", "2023", "", "Montreal to Indiana?",
  43770, "5068", "2023", "", "Montreal to Indiana?",
  43777, "5068", "2023", "", "Montreal to Indiana?",
  43778, "5068", "2023", "", "Montreal to Indiana?",
  43882, "5068", "2023", "", "Montreal to Indiana?",
  43883, "5068", "2023", "", "Montreal to Indiana?",
  43884, "5068", "2023", "", "Montreal to Indiana?",
  43979, "5068", "2023", "", "Montreal to Indiana?",
  43980, "5068", "2023", "", "Montreal to Indiana?",
  
  44752, "8415", "2023", "", "",
  48765, "8831", "2023", "", "Possibly fine, but dups from overlapping stns (8834 a stronger match)",
  48765, "8876", "2023", "", "Possibly fine, but dups from overlapping stns",
  #49419 checked and good
  #49421 checked and good
  
  50249, "8768-10128-10228", "2023-09-22", "2023-10-01", "",
  50714, "10128-10228", "2023-10-23", "2023-11-01", "Possible but unlikely",
  50715, "10128-10228", "2023-10-15", "2023-11-01", "Although 4206 not great either",
  50718, "10128-10228-10299", "2023-10-16", "2023-11-01", "Although 8938 not great either",
  50719, "10128-10228-10299", "2023-10-16", "2023-11-01", "",
  50720, "10128-10228", "2023-10-16", "2023-11-01", "Although 7290 not great either",
  50721, "10128-10228", "2023-10-16", "2023-11-01", "",
  50722, "10128-10228", "2023-10-16", "2023-11-01", "Although 5146 not great either",
  51213, "10128-10228-10299", "2023-10-30", "2023-11-05", "Although no others are great either",
) |>
  mutate(problem_manual = TRUE,
         start = ymd_hms(start, truncated = 5),
         end = ymd_hms(end, truncated = 5),
         end = if_else(is.na(end), ceiling_date(start + seconds(1), unit = "year"), end))

select(fix, -problem_manual) |>
  gt() |>
  gt_theme()  |>
  tab_options(container.height = px(600),
              container.overflow.y = "auto")
tagDeployID stn_group start end note
17852 4945 2018-01-01 2019-01-01
17856 4726-4790 2018-09-18 2018-10-15 Based on this group
18548 4726-4790 2018-09-15 2018-10-15
18880 4726-4790 2018-09-22 2018-10-15
18916 4726-4790 2018-09-15 2018-10-15
29919 5418 2020-01-01 2021-01-01
34266 7908-7930-7934 2021-09-11 2021-09-15
35290 7624-8039 2021-09-20 2021-10-16
35605 7662 2021-01-01 2022-01-01 Maybe?
35914 7624-8039-8045-8194 2021-09-15 2021-10-20
36310 7624-8039-8045-8194 2021-09-20 2021-10-16 based on the above, but none look good
39546 8845 2022-01-01 2023-01-01
39554 9193 2022-01-01 2023-01-01
39555 8845 2022-01-01 2023-01-01
39557 8845-9036 2022-01-01 2023-01-01
39557 9194 2022-01-01 2023-01-01 Also not sure about the 8279 or 8950
39570 9192-9194 2022-01-01 2023-01-01
39585 7905-7906-7930-7934-8760 2022-09-19 2023-01-01 Not sure about 8190, but 8283 looks good
39609 9150-9192 2022-01-01 2023-01-01
39612 3454 2022-01-01 2023-01-01
39615 9036 2022-01-01 2023-01-01
39615 9193 2022-01-01 2023-01-01 Also not really sure about 7662... 8593 is good though
39618 8769 2022-01-01 2023-01-01
41242 5511-8296-8415 2022-10-01 2022-12-01
41657 6115 2022-01-01 2023-01-01
41674 6115 2022-01-01 2023-01-01
41700 7624-8845-8857-9030-9036-9049 2022-09-29 2023-01-01
41826 8845-8847-9030-9036-9049 2022-09-26 2023-01-01
42002 7624-8845-8857-9030-9036-9049 2022-10-01 2023-01-01
42474 7624-8845-9021-9028-9030-9036-9049 2022-09-23 2023-01-01
42476 8845-9030-9036-9049 2022-09-19 2023-01-01
42787 8194-8845-9030-9036-9049 2022-09-15 05:00:00 2022-10-15
42890 8194-8845-9030-9036-9049 2022-10-15 2022-11-05
42974 8845-9030-9036-9049 2022-09-29 2023-01-01
42996 9193-9194 2022-01-01 2023-01-01
43000 8194-8845-9036-9049 2022-10-15 2022-11-01 Not sure about 8193
43016 8544 2023-01-01 2024-01-01 Probably not really all that bad, but just too far to be considered a group member, and only gets the odd ping
43065 8194-8845-9030-9036-9049 2022-10-02 2022-10-10
43258 8194-8845-9030-9036-9049 2022-10-19 02:00:00 2023-01-01
43351 8194-8845-9030-9036-9049 2022-10-15 2022-11-01
43460 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43518 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43637 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43638 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43639 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43640 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43718 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43719 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43768 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43770 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43777 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43778 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43882 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43883 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43884 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43979 5068 2023-01-01 2024-01-01 Montreal to Indiana?
43980 5068 2023-01-01 2024-01-01 Montreal to Indiana?
44752 8415 2023-01-01 2024-01-01
48765 8831 2023-01-01 2024-01-01 Possibly fine, but dups from overlapping stns (8834 a stronger match)
48765 8876 2023-01-01 2024-01-01 Possibly fine, but dups from overlapping stns
50249 8768-10128-10228 2023-09-22 2023-10-01
50714 10128-10228 2023-10-23 2023-11-01 Possible but unlikely
50715 10128-10228 2023-10-15 2023-11-01 Although 4206 not great either
50718 10128-10228-10299 2023-10-16 2023-11-01 Although 8938 not great either
50719 10128-10228-10299 2023-10-16 2023-11-01
50720 10128-10228 2023-10-16 2023-11-01 Although 7290 not great either
50721 10128-10228 2023-10-16 2023-11-01
50722 10128-10228 2023-10-16 2023-11-01 Although 5146 not great either
51213 10128-10228-10299 2023-10-30 2023-11-05 Although no others are great either
  • What’s up with the bunch of ids ~ 43882 etc. which all go from Indiana to Montreal?

Remove ’bad bouts

First remove manually defined ‘bad’ bouts, as well as previously identified “bad bouts” (these are those identified by super fast transitions).

bouts <- anti_join(bouts, fix, 
                   by = join_by("tagDeployID", "stn_group", 
                                within("timeBegin", "timeEnd", "start", "end"))) |>
  filter(!id %in% all_bad)
overlaps <- create_overlapping(bouts) 
trans <- create_trans(bouts, overlaps, dist)

Now a quick check to make sure that the only remaining problems are those that we said were okay. If any on this list are not those, double check the manual fix list and adjust as needed.

check_trans <- id_problems(trans)
filter(check_trans, problem) |>
  arrange(tagDeployID, b1) |>
  select(tagDeployID, stn1, b1, e1, stn2, b2, e2, contains("problem")) |>
  gt() |>
  gt_theme()
tagDeployID stn1 b1 e1 stn2 b2 e2 problem_manual problem_fast problem_short_bout problem_direction problem
18899 4030 2018-10-15 05:19:46.6936 2018-10-15 05:31:36.9747 4703 2018-10-17 02:45:11.8191 2018-10-17 02:48:02.5247 FALSE FALSE FALSE TRUE TRUE
29770 5232-6115-6154-6156-6175 2020-09-22 18:46:51.5033 2020-09-22 19:10:02.5629 5417 2020-11-01 12:26:49.7809 2020-11-01 12:32:11.0015 FALSE FALSE FALSE TRUE TRUE
49419 6115-8098-8387-8644-8662-8926-10024 2023-09-12 02:45:02.5567 2023-09-12 02:53:11.0275 9995 2023-09-12 10:21:10.0179 2023-09-12 10:31:26.953 FALSE FALSE FALSE TRUE TRUE
49419 9995 2023-09-12 10:21:10.0179 2023-09-12 10:31:26.953 9698-9699-9882 2023-09-13 11:28:42.4057 2023-09-13 12:23:57.5096 FALSE FALSE FALSE TRUE TRUE
49421 8110-8165-9859 2023-09-06 05:46:36.6914 2023-09-06 06:03:19.4855 8834 2023-09-06 11:52:49.215 2023-09-06 12:29:13.7646 FALSE FALSE FALSE TRUE TRUE

All good! The only remaining stations match those we check out as good:

  • 18899
  • 29770
  • 49419
  • 49421

Final data

At last! We have our final set of cleaned bouts and transitions

write_rds(bouts, "Data/02_Datasets/bouts_cleaned.rds")
write_rds(trans, "Data/02_Datasets/transitions_cleaned.rds")

Final plots

Here we’ll re-plot the manually adjusted plots (note that we only plot ids with at least one transition).

Code
ids <- trans |> 
  semi_join(fix, by = "tagDeployID") |>
  pull(tagDeployID) |>
  unique()

walk(ids, \(x) {
  g <- plot_bouts(trans, bouts = bouts, tagDeployID = x)
  ggsave(paste0("Figs/check2_", x, "_map.png"), g, width = 3840*1.5, height = 1920*1.5, units = "px")
})
Code
walk(ids, \(x) {
  cat("\n\n#### ", x, " {#", x, "}\n\n", sep = "")
  cat("\n![](Figs/check2_", x, "_map.png){out-width=100%}\n\n", sep = "")
  cat("\n\n", sep = "")
})

18916

17852

18548

17856

18880

35290

34266

35914

35605

36310

39554

39555

39618

39570

39609

39615

39557

41826

42476

42787

42474

39546

39585

42974

39612

41242

41657

41700

42002

42996

43016

43065

41674

43351

43000

42890

43258

44752

50249

48765

50722

50715

50721

50714

50720

50719

50718

51213

Reproducibility

devtools::session_info()
─ Session info ───────────────────────────────────────────────────────────────
 setting  value
 version  R version 4.4.0 (2024-04-24)
 os       Ubuntu 22.04.4 LTS
 system   x86_64, linux-gnu
 ui       X11
 language en_CA:en
 collate  en_CA.UTF-8
 ctype    en_CA.UTF-8
 tz       America/Winnipeg
 date     2024-07-04
 pandoc   3.1.1 @ /usr/lib/rstudio/resources/app/bin/quarto/bin/tools/ (via rmarkdown)

─ Packages ───────────────────────────────────────────────────────────────────
 ! package       * version  date (UTC) lib source
 P abind           1.4-5    2016-07-21 [?] CRAN (R 4.4.0)
 P arrow         * 16.1.0   2024-05-25 [?] CRAN (R 4.4.0)
 P assertr       * 3.0.1    2023-11-23 [?] CRAN (R 4.4.0)
 P assertthat      0.2.1    2019-03-21 [?] CRAN (R 4.4.0)
 P bit             4.0.5    2022-11-15 [?] CRAN (R 4.4.0)
 P bit64           4.0.5    2020-08-30 [?] CRAN (R 4.4.0)
 P blob            1.2.4    2023-03-17 [?] CRAN (R 4.4.0)
 P cachem          1.1.0    2024-05-16 [?] CRAN (R 4.4.0)
 P class           7.3-22   2023-05-03 [?] CRAN (R 4.3.1)
 P classInt        0.4-10   2023-09-05 [?] CRAN (R 4.4.0)
 P cli             3.6.2    2023-12-11 [?] CRAN (R 4.4.0)
 P codetools       0.2-19   2023-02-01 [?] CRAN (R 4.2.2)
 P colorspace      2.1-0    2023-01-23 [?] CRAN (R 4.4.0)
 P DBI           * 1.2.3    2024-06-02 [?] CRAN (R 4.4.0)
 P dbplyr          2.5.0    2024-03-19 [?] CRAN (R 4.4.0)
 P devtools        2.4.5    2022-10-11 [?] CRAN (R 4.4.0)
 P digest          0.6.35   2024-03-11 [?] CRAN (R 4.4.0)
 P dplyr         * 1.1.4    2023-11-17 [?] CRAN (R 4.4.0)
 P e1071           1.7-14   2023-12-06 [?] CRAN (R 4.4.0)
 P ebirdst       * 3.2022.3 2024-03-05 [?] CRAN (R 4.4.0)
 P ellipsis        0.3.2    2021-04-29 [?] CRAN (R 4.4.0)
 P evaluate        0.23     2023-11-01 [?] CRAN (R 4.4.0)
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 P farver          2.1.2    2024-05-13 [?] CRAN (R 4.4.0)
 P fastmap         1.2.0    2024-05-15 [?] CRAN (R 4.4.0)
 P fs              1.6.4    2024-04-25 [?] CRAN (R 4.4.0)
 P furrr         * 0.3.1    2022-08-15 [?] CRAN (R 4.4.0)
 P future        * 1.33.2   2024-03-26 [?] CRAN (R 4.4.0)
 P generics        0.1.3    2022-07-05 [?] CRAN (R 4.4.0)
 P ggplot2       * 3.5.1    2024-04-23 [?] CRAN (R 4.4.0)
 P ggrepel       * 0.9.5    2024-01-10 [?] CRAN (R 4.4.0)
 P ggspatial     * 1.1.9    2023-08-17 [?] CRAN (R 4.4.0)
 P globals         0.16.3   2024-03-08 [?] CRAN (R 4.4.0)
 P glue            1.7.0    2024-01-09 [?] CRAN (R 4.4.0)
 P gridExtra       2.3      2017-09-09 [?] CRAN (R 4.4.0)
 P gt            * 0.10.1   2024-01-17 [?] CRAN (R 4.4.0)
 P gtable          0.3.5    2024-04-22 [?] CRAN (R 4.4.0)
 P hms             1.1.3    2023-03-21 [?] CRAN (R 4.4.0)
 P htmltools       0.5.8.1  2024-04-04 [?] CRAN (R 4.4.0)
 P htmlwidgets     1.6.4    2023-12-06 [?] CRAN (R 4.4.0)
 P httpuv          1.6.15   2024-03-26 [?] CRAN (R 4.4.0)
 P httr            1.4.7    2023-08-15 [?] CRAN (R 4.4.0)
 P jsonlite        1.8.8    2023-12-04 [?] CRAN (R 4.4.0)
 P KernSmooth      2.23-22  2023-07-10 [?] CRAN (R 4.3.1)
 P knitr           1.47     2024-05-29 [?] CRAN (R 4.4.0)
 P labeling        0.4.3    2023-08-29 [?] CRAN (R 4.4.0)
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 P lifecycle       1.0.4    2023-11-07 [?] CRAN (R 4.4.0)
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 P lubridate     * 1.9.3    2023-09-27 [?] CRAN (R 4.4.0)
 P lutz          * 0.3.2    2023-10-17 [?] CRAN (R 4.4.0)
 P lwgeom          0.2-14   2024-02-21 [?] CRAN (R 4.4.0)
 P magrittr        2.0.3    2022-03-30 [?] CRAN (R 4.4.0)
 P memoise         2.0.1    2021-11-26 [?] CRAN (R 4.4.0)
 P mime            0.12     2021-09-28 [?] CRAN (R 4.4.0)
 P miniUI          0.1.1.1  2018-05-18 [?] CRAN (R 4.4.0)
 P motus         * 6.1.0    2024-05-02 [?] Github (motuswts/motus@a53a8b8)
 P munsell         0.5.1    2024-04-01 [?] CRAN (R 4.4.0)
 P naturecounts    0.4.0    2024-05-02 [?] Github (birdscanada/naturecounts@a6e52da)
 P parallelly      1.37.1   2024-02-29 [?] CRAN (R 4.4.0)
 P patchwork     * 1.2.0    2024-01-08 [?] CRAN (R 4.4.0)
 P pillar          1.9.0    2023-03-22 [?] CRAN (R 4.4.0)
 P pkgbuild        1.4.4    2024-03-17 [?] CRAN (R 4.4.0)
 P pkgconfig       2.0.3    2019-09-22 [?] CRAN (R 4.4.0)
 P pkgload         1.3.4    2024-01-16 [?] CRAN (R 4.4.0)
 P plyr            1.8.9    2023-10-02 [?] CRAN (R 4.4.0)
 P png             0.1-8    2022-11-29 [?] CRAN (R 4.4.0)
 P prettymapr      0.2.5    2024-02-23 [?] CRAN (R 4.4.0)
 P profvis         0.3.8    2023-05-02 [?] CRAN (R 4.4.0)
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 P proxy           0.4-27   2022-06-09 [?] CRAN (R 4.4.0)
 P purrr         * 1.0.2    2023-08-10 [?] CRAN (R 4.4.0)
 P R6              2.5.1    2021-08-19 [?] CRAN (R 4.4.0)
 P ragg            1.3.2    2024-05-15 [?] CRAN (R 4.4.0)
 P raster          3.6-26   2023-10-14 [?] CRAN (R 4.4.0)
 P Rcpp            1.0.12   2024-01-09 [?] CRAN (R 4.4.0)
 P readr         * 2.1.5    2024-01-10 [?] CRAN (R 4.4.0)
 P remotes         2.5.0    2024-03-17 [?] CRAN (R 4.4.0)
   renv            1.0.7    2024-04-11 [1] CRAN (R 4.4.0)
 P rlang           1.1.3    2024-01-10 [?] CRAN (R 4.4.0)
 P rmarkdown       2.27     2024-05-17 [?] CRAN (R 4.4.0)
 P rnaturalearth * 1.0.1    2023-12-15 [?] CRAN (R 4.4.0)
 P rosm            0.3.0    2023-08-27 [?] CRAN (R 4.4.0)
 P RSQLite         2.3.6    2024-03-31 [?] CRAN (R 4.4.0)
 P rstudioapi      0.16.0   2024-03-24 [?] CRAN (R 4.4.0)
 P sass            0.4.9    2024-03-15 [?] CRAN (R 4.4.0)
 P scales          1.3.0    2023-11-28 [?] CRAN (R 4.4.0)
 P sessioninfo     1.2.2    2021-12-06 [?] CRAN (R 4.4.0)
 P sf            * 1.0-16   2024-03-24 [?] CRAN (R 4.4.0)
 P shiny           1.8.1.1  2024-04-02 [?] CRAN (R 4.4.0)
 P sp              2.1-4    2024-04-30 [?] CRAN (R 4.4.0)
 P stringi         1.8.4    2024-05-06 [?] CRAN (R 4.4.0)
 P stringr       * 1.5.1    2023-11-14 [?] CRAN (R 4.4.0)
 P systemfonts     1.1.0    2024-05-15 [?] CRAN (R 4.4.0)
 P terra           1.7-71   2024-01-31 [?] CRAN (R 4.4.0)
 P textshaping     0.4.0    2024-05-24 [?] CRAN (R 4.4.0)
 P tibble        * 3.2.1    2023-03-20 [?] CRAN (R 4.4.0)
 P tidyr         * 1.3.1    2024-01-24 [?] CRAN (R 4.4.0)
 P tidyselect      1.2.1    2024-03-11 [?] CRAN (R 4.4.0)
 P timechange      0.3.0    2024-01-18 [?] CRAN (R 4.4.0)
 P tzdb            0.4.0    2023-05-12 [?] CRAN (R 4.4.0)
 P units         * 0.8-5    2023-11-28 [?] CRAN (R 4.4.0)
 P urlchecker      1.0.1    2021-11-30 [?] CRAN (R 4.4.0)
 P usethis         2.2.3    2024-02-19 [?] CRAN (R 4.4.0)
 P utf8            1.2.4    2023-10-22 [?] CRAN (R 4.4.0)
 P vctrs           0.6.5    2023-12-01 [?] CRAN (R 4.4.0)
 P viridis         0.6.5    2024-01-29 [?] CRAN (R 4.4.0)
 P viridisLite     0.4.2    2023-05-02 [?] CRAN (R 4.4.0)
 P withr           3.0.0    2024-01-16 [?] CRAN (R 4.4.0)
 P xfun            0.44     2024-05-15 [?] CRAN (R 4.4.0)
 P xml2            1.3.6    2023-12-04 [?] CRAN (R 4.4.0)
 P xtable          1.8-4    2019-04-21 [?] CRAN (R 4.4.0)
 P yaml            2.3.8    2023-12-11 [?] CRAN (R 4.4.0)

 [1] /home/steffi/Projects/Business/Barbara Frei/urban_motus/renv/library/linux-ubuntu-jammy/R-4.4/x86_64-pc-linux-gnu
 [2] /home/steffi/.cache/R/renv/sandbox/linux-ubuntu-jammy/R-4.4/x86_64-pc-linux-gnu/9a444a72

 P ── Loaded and on-disk path mismatch.

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